load_plibdata

load_plibdata(contexts_ids, preprocessing_type='mean_aggregation', plibdata_type=<class 'perturb_lib.data.plibdata.InMemoryPlibData'>)[source]

Load data from given context(s) as PlibData.

Note

Triggers data caching.

Parameters:

  • contexts_ids (str | Sequence[str]) – Either a list of context identifiers that will be stacked together, or a single context id. If

  • identifier (no match is found for an)

  • included. (all identifiers that contain that substring will be)

  • preprocessing_type (Literal['raw', 'median_aggregation', 'mean_aggregation', 'standard_preprocessing']) – The type of preprocessing to apply.

  • plibdata_type (type[PlibData]) – The type of PlibData to use.

Return type:

PlibData

Returns:

An instance of a PlibData that has columns [context, perturbation, readout, value].